Nelson, M., Straneo, F., Purkey, S. G., Waterhouse, A. F., Fogaren, K. E., & Torres, D. J. (2025). Observations of Water Mass Modification and Cross‐Shelf Exchange at Narsaq Trough, Greenland. Journal of Geophysical Research: Oceans, 130(5), e2024JC022246. https://doi.org/10.1029/2024JC022246

McBride, K., MacKinnon, J., Franks, P. J. S., McSweeney, J. M., Waterhouse, A. F., Palóczy, A., Colosi, J., & MacMahan, J. (2024). A juvenile journey: Using a highly resolved 3D mooring array to investigate the roles of wind and internal tide forcing in across‐shore larval transport. Limnology and Oceanography, lno.12675. https://doi.org/10.1002/lno.12675

Stokes, I. A., Kelly, S. M., Lucas, A. J., Waterhouse, A. F., Whalen, C. B., Klenz, T., Hormann, V., & Centurioni, L. (2024). A Generalized Slab Model. Journal of Physical Oceanography, 54(3), 949–965. https://doi.org/10.1175/JPO-D-23-0167.1

Scripps Institution of Oceanography, University of California, San Diego, Voet, G., Waterhouse, A., Savage, A., Kunze, E., MacKinnon, J., Alford, M., Colosi, J., Simmons, H., Klenz, T., Kelly, S., Moum, J., Whalen, C., Lien, R.-C., & Girton, J. (2024). Near-Inertial Energy Variability in a Strong Mesoscale Eddy Field in the Iceland Basin. Oceanography. https://doi.org/10.5670/oceanog.2024.302

Pinkel, R., Nguyen, S., Smith, J. A., Lucas, A. J., Reineman, B. D., & Waterhouse, A. F. (2023). Vertical Momentum Transport by Internal Gravity Waves Above the Equatorial Undercurrent at 140°W. Geophysical Research Letters, 50(14), e2022GL101630. https://doi.org/10.1029/2022GL101630

Waterhouse, A. F., Hennon, T., Kunze, E., MacKinnon, J. A., Alford, M. H., Pinkel, R., Simmons, H., Whalen, C. B., Fine, E. C., Klymak, J., & Hummon, J. M. (2022). Global Observations of Rotary-With-Depth Shear Spectra. Journal of Physical Oceanography. https://doi.org/10.1175/JPO-D-22-0015.1

Yu, X., Naveira Garabato, A. C., Vic, C., Gula, J., Savage, A. C., Wang, J., Waterhouse, A. F., & MacKinnon, J. A. (2022). Observed Equatorward Propagation and Chimney Effect of Near‐Inertial Waves in the Midlatitude Ocean. Geophysical Research Letters, 49(13). https://doi.org/10.1029/2022GL098522

Trossman, D. S., Whalen, C. B., Haine, T. W. N., Waterhouse, A. F., Nguyen, A. T., Bigdeli, A., Mazloff, M., & Heimbach, P. (2022). Tracer and observationally derived constraints on diapycnal diffusivities in an ocean state estimate. Ocean Science, 18(3), 729–759. https://doi.org/10.5194/os-18-729-2022

Spydell, M. S., Suanda, S. H., Grimes, D. J., Becherer, J., McSweeney, J. M., Chickadel, C., Moulton, M., Thomson, J., Lerczak, J., Barth, J., Macmahan, J., Colosi, J., Romeiser, R., Waterhouse, A. F., Calantoni, J., & Feddersen, F. (2021). Internal bore evolution across the shelf near Pt. Sal, California, interpreted as a gravity current. Journal of Physical Oceanography, 51(12), 3629–3650. https://doi.org/10.1175/jpo-d-21-0095.1

Franks, P. J. S., Inman, B. G., MacKinnon, J. A., Alford, M. H., & Waterhouse, A. F. (2021). Oceanic turbulence from a planktonic perspective. Limnology and Oceanography, 16. https://doi.org/10.1002/lno.11996

Haney, S. R., Simpson, A. J., McSweeney, J. M., Waterhouse, A. F., Haller, M. C., Lerczak, J. A., Barth, J. A., Lenain, L., Paloczy, A., Adams, K., & MacKinnon, J. A. (2021). Lifecycle of a submesoscale front birthed from a nearshore internal bore. Journal of Physical Oceanography, 51(11), 3477–3493. https://doi.org/10.1175/jpo-d-21-0062.1

Shroyer, E., Tandon, A., Sengupta, D., Fernando, H. J. S., Lucas, A. J., Farrar, J. T., Chattopadhyay, R., de Szoeke, S., Flatau, M., Rydbeck, A., Wijesekera, H., McPhaden, M., Seo, H., Subramanian, A., Venkatesan, R., Joseph, J., Ramsundaram, S., Gordon, A. L., Bohman, S. M., … Subrahmanyam, B. (2021). Bay of Bengal intraseasonal oscillations and the 2018 monsoon onset. Bulletin of the American Meteorological Society, 102(10), E1936–E1951. https://doi.org/10.1175/bams-d-20-0113.1

Becherer, J., Moum, J. N., Calantoni, J., Colosi, J. A., Barth, J. A., Lerczak, J. A., McSweeney, J. M., MacKinnon, J. A., & Waterhouse, A. F. (2021). Saturation of the internal tide over the inner continental shelf. Part ii: Parameterization. Journal of Physical Oceanography, 51(8), 2565–2582. https://doi.org/10.1175/jpo-d-21-0047.1

Becherer, J., Moum, J. N., Calantoni, J., Colosi, J. A., Barth, J. A., Lerczak, J. A., McSweeney, J. M., MacKinnon, J. A., & Waterhouse, A. F. (2021). Saturation of the internal tide over the inner continental shelf. Part i: Observations. Journal of Physical Oceanography, 51(8), 2553–2563. https://doi.org/10.1175/jpo-d-20-0264.1

Kelly, S. M., Waterhouse, A. F., & Savage, A. C. (2021). Global dynamics of the stationary M-2 Mode-1 internal tide. Geophysical Research Letters, 48(11). https://doi.org/10.1029/2020gl091692

Kumar, N., Lerczak, J. A., Xu, T. T., Waterhouse, A. F., Thomson, J., Terrill, E. J., Swann, C., Suanda, S. H., Spydell, M. S., Smit, P. B., Simpson, A., Romeiser, R., Pierce, S. D., de Paolo, T., Paloczy, A., O’Dea, A., Nyman, L., Moum, J. N., Moulton, M., … Ahn, S. (2021). The Inner-Shelf Dynamics Experiment. Bulletin of the American Meteorological Society, 102(5), E1033–E1063. https://doi.org/10.1175/bams-d-19-0281.1

Paloczy, A., MacKinnon, J. A., & Waterhouse, A. F. (2021). Subtidal to supertidal variability of Reynolds stresses in a midlatitude stratified inner shelf. Journal of Physical Oceanography, 51(4), 1091–1111. https://doi.org/10.1175/jpo-d-20-0140.1

Hamann, M. M., Alford, M. H., Lucas, A. J., Waterhouse, A. F., & Voet, G. (2021). Turbulence driven by reflected internal tides in a supercritical submarine canyon. Journal of Physical Oceanography, 51(2), 591–609. https://doi.org/10.1175/jpo-d-20-0123.1

Marques, O. B., Alford, M. H., Pinkel, R., MacKinnon, J. A., Klymak, J. M., Nash, J. D., Waterhouse, A. F., Kelly, S. M., Simmons, H. L., & Braznikov, D. (2021). Internal tide structure and temporal variability on the reflective continental slope of southeastern Tasmania. Journal of Physical Oceanography, 51(2), 611–631. https://doi.org/10.1175/jpo-d-20-0044.1

McSweeney, J. M., Lerczak, J. A., Barth, J. A., Becherer, J., MacKinnon, J. A., Waterhouse, A. F., Colosi, J. A., MacMahan, J. H., Feddersen, F., Calantoni, J., Simpson, A., Celona, S., Haller, M. C., & Terrill, E. (2020). Alongshore variability of shoaling internal bores on the inner shelf. Journal of Physical Oceanography, 50(10), 2965–2981.

Savage, A. C., Waterhouse, A. F., & Kelly, S. M. (2020). Internal tide nonstationarity and wave-mesoscale interactions in the Tasman Sea. Journal of Physical Oceanography, 50(10), 2931–2951. https://doi.org/10.1175/jpo-d-19-0283.1

de Lavergne, C., Vic, C., Madec, G., Roquet, F., Waterhouse, A. F., Whalen, C. B., Cuypers, Y., Bouruet-Aubertot, P., Ferron, B., & Hibiya, T. (2020). A parameterization of local and remote tidal mixing. Journal of Advances in Modeling Earth Systems, 12(5). https://doi.org/10.1029/2020ms002065

Shroyer, E. L., Gordon, A. L., Jaeger, G. S., Freilich, M., Waterhouse, A. F., Farrar, J. T., Sarma, V., Venkatesan, R., Weller, R. A., Moum, J. N., & Mahadevan, A. (2020). Upper layer thermohaline structure of the Bay of Bengal during the 2013 northeast monsoon. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 172. https://doi.org/10.1016/j.dsr2.2019.07.018

McSweeney, J. M., Lerczak, J. A., Barth, J. A., Becherer, J., Colosi, J. A., MacKinnon, J. A., MacMahan, J. H., Moum, J. N., Pierce, S. D., & Waterhouse, A. F. (2020). Observations of shoaling nonlinear internal bores across the central California inner shelf. Journal of Physical Oceanography, 50(1), 111–132. https://doi.org/10.1175/jpo-d-19-0125.1

Johnston, T. M. S., MacKinnon, J. A., Colin, P. L., Haley, P. J., Lermusiaux, P. F. J., Lucas, A. J., Merrifield, M. A., Merrifield, S. T., Mirabito, C., Nash, J. D., Ou, C. Y., Siegeiman, M., Terrill, E. J., & Waterhouse, A. F. (2019). Energy and momentum lost to wake eddies and lee waves generated by the north equatorial current and tidal flows at Peleliu, Palau. Oceanography, 32(4), 110–125. https://doi.org/10.5670/oceanog.2019.417

Roemmich, D., Alford, M. H., Claustre, H., Johnson, K., King, B., Moum, J., Oke, P., Owens, W. B., Pouliquen, S., Purkey, S., Scanderbeg, M., Suga, T., Wijffels, S., Zilberman, N., Bakker, D., Baringer, M., Belbeoch, M., Bittig, H. C., Boss, E., … Yasuda, I. (2019). On the future of Argo: A global, full-depth, multi-disciplinary array. Frontiers in Marine Science, 6. https://doi.org/10.3389/fmars.2019.00439

Vic, C., Garabato, A. C. N., Green, J. A. M., Waterhouse, A. F., Zhao, Z. X., Melet, A., de Lavergne, C., Buijsman, M. C., & Stephenson, G. R. (2019). Deep-ocean mixing driven by small-scale internal tides. Nature Communications, 10. https://doi.org/10.1038/s41467-019-10149-5

Amy F. Waterhouse, Samuel M. Kelly, Zhongxiang Zhao, Jennifer A. MacKinnon, Jonathan D. Nash, Harper Simmons, Dmitry Brahznikov, Luc Rainville, Matthew Alford, & Rob Pinkel. (2018). Observations of the Tasman Sea internal tide beam. Journal of Physical Oceanography, 48(6), 1283–1297. https://doi.org/10.1175/jpo-d-17-0116.1

Ramachandran, S., Tandon, A., Mackinnon, J., Lucas, A. J., Pinkel, R., Waterhouse, A. F., Nash, J., Shroyer, E., Mahadevan, A., Weller, R. A., & Farrar, J. T. (2018). Submesoscale processes at shallow salinity fronts in the Bay of Bengal: Observations during the winter monsoon. Journal of Physical Oceanography, 48(3), 479–509. https://doi.org/10.1175/jpo-d-16-0283.1

Shroyer, E. L., Nash, J. D., Waterhouse, A. F., & Moum, J. N. (2018). Measuring Ocean Turbulence. In R. Venkatesan, A. Tandon, E. D’Asaro, & M. A. Atmanand (Eds.), Observing the Oceans in Real Time (pp. 99–122). Springer International Publishing.

Musgrave, R. C., MacKinnon, J. A., Pinkel, R., Waterhouse, A. F., Nash, J., & Kelly, S. M. (2017). The Influence of Subinertial Internal Tides on Near-Topographic Turbulence at the Mendocino Ridge: Observations and Modeling. Journal of Physical Oceanography, 47(8), 2139–2154. https://doi.org/10.1175/jpo-d-16-0278.1

Jennifer A. MacKinnon, Matthew H. Alford, Joseph K. Ansong, Brian K. Arbic, Andrew Barna, Bruce P. Briegleb, Frank O. Bryan, Maarten C. Buijsman, Eric P. Chassignet, Gokhan Danabasoglu, Steve Diggs, Stephen M. Griffies, Robert W. Hallberg, Steven R. Jayne, Markus Jochum, Jody M. Klymak, Eric Kunze, William G. Large, Sonya Legg, … Zhongxiang Zhao. (2017). Climate process team on internal-wave driven ocean mixing. Bulletin of the American Meteorological Society. https://doi.org/10.1175/bams-d-16-0030.1

Waterhouse, A. F., Mackinnon, J. A., Musgrave, R. C., Kelly, S. M., Pickering, A., & Nash, J. (2017). Internal tide convergence and mixing in a submarine canyon. Journal of Physical Oceanography, 47(2), 303–322. https://doi.org/10.1175/jpo-d-16-0073.1

Hemantha W. Wijesekera, Emily Shroyer, Amit Tandon, M. Ravichandran, Debasis Sengupta, S. U. P. Jinadasa, Harindra J. S. Fernando, Neeraj Agrawal, K. Arulananthan, G. S. Bhat, Mark Baumgartner, Jared Buckley, Luca Centurioni, Patrick Conry, J. Thomas Farrar, Arnold L. Gordon, Verena Hormann, Ewa Jarosz, Tommy G. Jensen, … Caitlin B. Whalen. (2016). ASIRI: An Ocean–Atmosphere Initiative for Bay of Bengal. Bulletin of the American Meteorological Society, 97(10), 1859–1884. https://doi.org/10.1175/bams-d-14-00197.1

MacKinnon, J. A., Nash, J. D., Alford, M. H., Lucas, A. J., Mickett, J. B., Shroyer, E. L., Waterhouse, A. F., Tandon, A., Sengupta, D., Mahadevan, A., Ravichandran, M., Pinkel, R., Rudnick, D. L., Whalen, C. B., Alberty, M. S., Lekha, J. S., Fine, E. C., Chaudhuri, D., & Wagner, G. L. (2016). A tale of two spicy seas. Oceanography, 29(2), 50–61. https://doi.org/10.5670/oceanog.2016.38

Musgrave, R. C., MacKinnon, J. A., Pinkel, R., Waterhouse, A. F., & Nash, J. (2016). Tidally driven processes leading to near-field turbulence in a channel at the crest of the Mendocino Escarpment*. Journal of Physical Oceanography, 46(4), 1137–1155. https://doi.org/10.1175/jpo-d-15-0021.1

Whalen, C. B., MacKinnon, J. A., Talley, L. D., & Waterhouse, A. F. (2015). Estimating the mean diapycnal mixing using a finescale strain parameterization. Journal of Physical Oceanography, 45(4), 1174–1188. https://doi.org/10.1175/jpo-d-14-0167.1

Waterhouse, A. F., MacKinnon, J. A., Nash, J. D., Alford, M. H., Kunze, E., Simmons, H. L., Polzin, K. L., St Laurent, L. C., Sun, O. M., Pinkel, R., Talley, L. D., Whalen, C. B., Huussen, T. N., Carter, G. S., Fer, I., Waterman, S., Garabato, A. C. N., Sanford, T. B., & Lee, C. M. (2014). Global patterns of diapycnal mixing from measurements of the turbulent dissipation rate. Journal of Physical Oceanography, 44(7), 1854–1872. https://doi.org/10.1175/jpo-d-13-0104.1

Waterhouse, A. F., Tutak, B., Valle-Levinson, A., & Sheng, Y. P. (2013). Influence of two tropical storms on the residual flow in a subtropical tidal inlet. Estuaries and Coasts, 36(5), 1037–1053. https://doi.org/10.1007/s12237-013-9606-3

Kelly, S. M., Jones, N. L., Nash, J. D., & Waterhouse, A. F. (2013). The geography of semidiurnal mode-1 internal-tide energy loss. Geophysical Research Letters, 40(17), 4689–4693. https://doi.org/10.1002/grl.50872

Waterhouse, A. F., Valle-Levinson, A., & Perez, R. A. M. (2012). Tidal asymmetries of velocity and stratification over a bathymetric depression in a tropical inlet. Continental Shelf Research, 48, 87–99. https://doi.org/10.1016/j.csr.2012.08.002

Valle-Levinson, A., Marino-Tapia, I., Enriquez, C., & Waterhouse, A. F. (2011). Tidal variability of salinity and velocity fields related to intense point-source submarine groundwater discharges into the coastal ocean. Limnology and Oceanography, 56(4), 1213–1224. https://doi.org/10.4319/lo.2011.56.4.1213

Waterhouse, A. F., Valle-Levinson, A., & Winant, C. D. (2011). Tides in a System of Connected Estuaries. Journal of Physical Oceanography, 41(5), 946–959. https://doi.org/10.1175/2010jpo4504.1

Safak, I., Sheremet, A., Valle-Levinson, A., & Waterhouse, A. F. (2010). Variation of overtides by wave enhanced bottom drag in a North Florida tidal inlet. Continental Shelf Research, 30(18), 1963–1970. https://doi.org/10.1016/j.csr.2010.09.007

Waterhouse, A. F., & Valle-Levinson, A. (2010). Transverse structure of subtidal flow in a weakly stratified subtropical tidal inlet. Continental Shelf Research, 30(3–4), 281–292. https://doi.org/10.1016/j.csr.2009.11.008

Murphy, P., Waterhouse, A., Hesser, T., Penko, A., & Valle-Levinson, A. (2009). Subtidal flow and its variability at the entrance to a subtropical lagoon. Continental Shelf Research, 29(20), 2318–2332. https://doi.org/10.1016/j.csr.2009.09.011

Waterhouse, A. F., Allen, S. E., & Bowie, A. W. (2009). Upwelling flow dynamics in long canyons at low Rossby number. Journal of Geophysical Research-Oceans, 114. https://doi.org/10.1029/2008jc004956